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Benchmarks
Protein Pocket Design on PPDBench (test)
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48.19
AAR
PocketFlow
25.414
31.327
37.24
43.153
Sep 29, 2024
AAR
scRMSD
ΔΔG
Updated 4d ago
Evaluation Results
Method
Method
Links
AAR
scRMSD
ΔΔG
PocketFlow
Affinity Guidance=true...
2024.09
48.19
0.67
-1.06
PocketFlow (w/o Aff Guide)
Affinity Guidance=fals...
2024.09
47.78
0.7
-0.47
PocketFlow (w/o Geo Guide)
Affinity Guidance=true...
2024.09
47.3
0.72
-0.96
RFDiffusionAA
Checkpoint=[1]
2024.09
46.85
0.65
-0.62
PocketFlow (w/o Geo & Aff Guide)
Affinity Guidance=fals...
2024.09
44.63
0.78
-0.31
PocketFlow (w/o Inter Learning)
Affinity Guidance=true...
2024.09
36.41
0.74
-0.34
FAIR
Pre-training=protein-s...
2024.09
32.53
0.86
0.05
dyMEAN
Pre-training=protein-s...
2024.09
26.29
0.71
-0.23
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