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Benchmarks
scRNA-seq integration on lung atlas
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0.62
Batch Correction
scVI tools
0.31632
0.39516
0.474
0.55284
Feb 6, 2024
Batch Correction
Bio Conservation
Total Score
Updated 4d ago
Evaluation Results
Method
Method
Links
Batch Correction
Bio Conservation
Total Score
scVI tools
Prior=N(0, I)
2024.02
0.62
0.608
0.613
scVI (our code)
Prior=N(0, I)
2024.02
0.616
0.6
0.607
scVI (our code)
Prior=GMM
2024.02
0.611
0.628
0.621
scVI (our code)
Prior=VMM
2024.02
0.562
0.674
0.629
Harmony
Prior=N/A
2024.02
0.553
0.678
0.628
scVI (our code)
Prior=VampPrior
2024.02
0.538
0.688
0.628
Scanorama
Prior=N/A
2024.02
0.328
0.694
0.548
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