SOTA Trajectory Inference benchmarks and papers with code

Benchmarks

Dataset Name	SOTA Method	Metric
EB dataset 5D (test)	JKOnet	W1 (t=1)1.27	23	1mo ago
EB 50D t=4	WFR-MFM	W1 Score6.647	11	1mo ago
50D EB t=3	WFR-MFM	W16.19	11	1mo ago
50D EB dataset t=2	WFR-MFM	W1 Error5.904	11	1mo ago
50D EB dataset t=1	WFR-MFM	W15.236	11	1mo ago
10D EMT t=3	WFR-FM	W10.2346	11	1mo ago
10D EMT t=2	WFR-FM	W10.2272	11	1mo ago
10D EMT t=1	WFR-FM	W10.2099	11	1mo ago
Dyngen t=4	WFR-FM	W10.121	11	1mo ago
Dyngen t=3	WFR-MFM	W10.202	11	1mo ago
Dyngen (t=2)	WFR-FM	W10.098	11	1mo ago
Dyngen t=1	WFR-FM	W1 Score0.11	11	1mo ago
100D EB dataset (t=4)	DeepRUOT	W1 Error12.406	11	1mo ago
100D EB dataset (t=3)	WFR-FM	W1 Error11.516	11	1mo ago
100D EB dataset t=2	WFR-FM	W111.04	11	1mo ago
100D EB dataset t=1	WFR-FM	W19.941	11	1mo ago
Multi scRNA-seq	OT-MFM	EMD45.879	10	1mo ago
Cite scRNA-seq	OT-MFM	EMD36.471	10	1mo ago
Dataset II (All)		Average Localization Error (Eloc)0.66	9	1mo ago
Dataset Double LOS II		Avg Loc Error (Eloc)0.57	9	1mo ago
Dataset Single LOS II		Avg Loc Error (Eloc)0.79	9	1mo ago
Dataset NLOS II		Avg Loc Error (Eloc)1.02	9	1mo ago
Multiome (Multi) 5D PCA scRNA-seq data (held-out marginal distributions)	OT-MFM	EMD0.89	6	1mo ago
Embryoid Body (EB) 5D PCA scRNA-seq (held-out marginal distributions)	OT-MFM	EMD0.711	6	1mo ago
Cite-seq 5D PCA scRNA-seq data (held-out marginal distributions)	OT-MFM	EMD0.793	6	1mo ago

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