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Benchmarks
Cell-level clustering on Phenotype labels
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16
ARI
BFT
6.64
9.07
11.5
13.93
Nov 26, 2025
ARI
AMI
ASW
Updated 3mo ago
Evaluation Results
Method
Method
Links
ARI
AMI
ASW
BFT
Encoder=Youtu-Embedding
2025.11
16
24
0.02
BFT
Encoder=BioBERT
2025.11
15
22
0.018
PCA
Encoder=Not Specified
2025.11
13
15
0.01
scGPT
Encoder=Not Specified
2025.11
12
12
0.01
GenePT
Encoder=Not Specified
2025.11
12
11
0.02
SFT
Encoder=Youtu-Embedding
2025.11
10
12
0.005
SFT
Encoder=BioBERT
2025.11
9
11
0.004
DFT
Encoder=Youtu-Embedding
2025.11
8
10
0.002
DFT
Encoder=BioBERT
2025.11
7
9
0.001
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