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Benchmarks
Cell type annotation on hPancreas
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97.7
Accuracy
HVG
95.9008
96.3679
96.835
97.3021
Apr 22, 2025
Accuracy
Macro-F1
Updated 4d ago
Evaluation Results
Method
Method
Links
Accuracy
Macro-F1
HVG
Selected Genes=top 2,0...
2025.04
97.7
70.29
GeneMamba
Epochs=100, Batch size...
2025.04
97.13
77.1
GeneMamba
Training Setup=Supervi...
2025.04
97.13
77.1
scGPT
Training Setup=Supervi...
2025.04
97.1
76.32
Seurat
Version=R v4.4.0, Redu...
2025.04
96.68
73.46
GeneFormer
Training Setup=Supervi...
2025.04
96.65
74.5
scANVI
Tool=scvi-tools==1.1.0...
2025.04
96.62
70.23
scFoundation
Training Setup=Supervi...
2025.04
96.02
71.01
scVI
Tool=scvi-tools==1.1.0...
2025.04
95.97
66.31
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