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Benchmarks
Clinical Concept Extraction on i2b2 2010 (test)
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90.25
Exact F1
BERTlarge
79.9852
82.6501
85.315
87.9799
Feb 22, 2019
Exact F1
Updated 3d ago
Evaluation Results
Method
Method
Links
Exact F1
BERTlarge
Pre-training Corpus=MIMIC
2019.02
90.25
BERTbase
Pre-training Corpus=MIMIC
2019.02
89.55
Prior SOTA (Zhu et al., 2018)
2019.02
88.6
ELMo
Pre-training Corpus=MIMIC
2019.02
87.8
BERTlarge
Pre-training Corpus=Ge...
2019.02
85.48
GloVe
Pre-training Corpus=MIMIC
2019.02
85.07
BioBERT
Pre-training Corpus=Ge...
2019.02
84.76
BERTbase
Pre-training Corpus=Ge...
2019.02
84.33
word2vec
Pre-training Corpus=MIMIC
2019.02
84.32
fastText
Pre-training Corpus=MIMIC
2019.02
84.19
GloVe
Pre-training Corpus=Ge...
2019.02
84.08
ELMo
Pre-training Corpus=Ge...
2019.02
83.83
fastText
Pre-training Corpus=Ge...
2019.02
83.46
word2vec
Pre-training Corpus=Ge...
2019.02
80.38
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