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Benchmarks
Clinical Concept Extraction on i2b2 2012 (test)
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80.91
Exact F1
BERTlarge
70.6764
73.3332
75.99
78.6468
Feb 22, 2019
Exact F1
Updated 3d ago
Evaluation Results
Method
Method
Links
Exact F1
BERTlarge
Pre-training Corpus=MIMIC
2019.02
80.91
ELMo
Pre-training Corpus=MIMIC
2019.02
80.5
BERTbase
Pre-training Corpus=MIMIC
2019.02
80.34
BERTlarge
Pre-training Corpus=Ge...
2019.02
78.14
BioBERT
Pre-training Corpus=Ge...
2019.02
77.77
BERTbase
Pre-training Corpus=Ge...
2019.02
76.62
ELMo
Pre-training Corpus=Ge...
2019.02
76.61
GloVe
Pre-training Corpus=MIMIC
2019.02
75.27
word2vec
Pre-training Corpus=MIMIC
2019.02
75.09
GloVe
Pre-training Corpus=Ge...
2019.02
74.95
fastText
Pre-training Corpus=MIMIC
2019.02
74.83
fastText
Pre-training Corpus=Ge...
2019.02
73.24
word2vec
Pre-training Corpus=Ge...
2019.02
71.07
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