Fluorescence Prediction on TAPE

0.636Spearman Correlation

ProteinBERT2-150M masked-pos

Updated 23d ago

Evaluation Results

Method	Links
ProteinBERT2-150M masked-pos 2026.05		0.636
AMPLIFY-120M MLM-only 2026.05		0.621
Rand-Init-35M MLM-only 2026.05		0.619
ProteinBERT2-35M Masked-pos 2026.05		0.617
AMPLIFY-120M Masked-pos 2026.05		0.616
AMPLIFY-120M Baseline 2026.05		0.615
ESM2-150M All-pos MLM+JEPA 2026.05		0.61
ESM2-150M MLM-only 2026.05		0.608
Rand-Init-35M Masked-pos 2026.05		0.607
ESM2-35M MLM-only 2026.05		0.603
AMPLIFY-120M All-pos MLM+JEPA 2026.05		0.598
MLM+JEPA @90k 2026.05		0.593
ESM2-35M Masked-pos (AdamW) 2026.05		0.591
ESM2-35M Baseline 2026.05		0.59
ESM2-150M Masked-pos (run 2) 2026.05		0.589
ESM2-35M Masked-pos (SGDm) 2026.05		0.584
ESM2-150M Baseline 2026.05		0.578
ProteinBERT2-35M All-pos MLM+JEPA 2026.05		0.578
ESM2-35M All-pos MLM+JEPA 2026.05		0.577
ESM2-150M Masked-pos (run 1) 2026.05		0.577
ESM2-150M EMA (4h) EMA 2026.05		0.567
AMPLIFY-120M JEPA-only 2026.05		0.559
ESM2-150M rand-init MLM-only 2026.05		0.558
ProteinBERT2-35M Baseline 2026.05		0.548
ProteinBERT2-35M MLM-only 2026.05		0.537
JEPA-only @90k 2026.05		0.495
Rand-Init-35M All-pos MLM+JEPA 2026.05		0.465
Rand-Init-35M JEPA-only 2026.05		0.454
ESM2-150M JEPA-only 2026.05		0.44
Rand-Init-35M Baseline 2026.05		0.362
ProteinBERT2-35M JEPA-only 2026.05		0.295
ESM2-35M JEPA-only 2026.05		0.264