Stability Prediction on Biomap

0.748Spearman Correlation

ESM2-150M EMA (4h) EMA

Updated 23d ago

Evaluation Results

Method	Links
ESM2-150M EMA (4h) EMA 2026.05		0.748
AMPLIFY-120M Baseline 2026.05		0.729
ESM2-150M Baseline 2026.05		0.704
ESM2-150M Masked-pos (run 2) 2026.05		0.699
ESM2-150M Masked-pos (run 1) 2026.05		0.654
ProteinBERT2-35M Masked-pos 2026.05		0.642
ESM2-150M MLM-only 2026.05		0.629
MLM+JEPA @90k 2026.05		0.628
ESM2-150M All-pos MLM+JEPA 2026.05		0.627
Rand-Init-35M MLM-only 2026.05		0.595
AMPLIFY-120M Masked-pos 2026.05		0.583
ProteinBERT2-150M masked-pos 2026.05		0.571
AMPLIFY-120M MLM-only 2026.05		0.558
ESM2-35M Masked-pos (AdamW) 2026.05		0.545
Rand-Init-35M Masked-pos 2026.05		0.537
ESM2-35M All-pos MLM+JEPA 2026.05		0.529
ESM2-35M MLM-only 2026.05		0.507
JEPA-only @90k 2026.05		0.507
ESM2-35M Masked-pos (SGDm) 2026.05		0.493
AMPLIFY-120M All-pos MLM+JEPA 2026.05		0.451
ESM2-35M Baseline 2026.05		0.44
ProteinBERT2-35M All-pos MLM+JEPA 2026.05		0.405
AMPLIFY-120M JEPA-only 2026.05		0.379
ESM2-150M rand-init MLM-only 2026.05		0.359
Rand-Init-35M All-pos MLM+JEPA 2026.05		0.328
ProteinBERT2-35M MLM-only 2026.05		0.278
Rand-Init-35M JEPA-only 2026.05		0.249
ProteinBERT2-35M Baseline 2026.05		0.249
ESM2-150M JEPA-only 2026.05		0.116
Rand-Init-35M Baseline 2026.05		0.072
ProteinBERT2-35M JEPA-only 2026.05		0.018
ESM2-35M JEPA-only 2026.05		-0.089