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Perturbation prediction on PBMC

81DE Overlap

SCALE

Updated 2mo ago

Evaluation Results

Method
SCALE 2026.03	81	-	83.1	-	68.2	0.516	-	-	0.979	0.032	0.118	-	-	-
PerturbDiff 2026.02	56.4	0.997	58.1	0.288	75.1	0.519	60.7	60.3	0.816	0.0002	0.006	0.972	0.975	0.986
Mean 2026.02	56.4	0.959	54.4	0.011	74	0.478	54.5	50.6	0.642	0.0008	0.013	0.73	0.777	0.787
PerturbDiff 2026.03	56.4	-	58.1	-	75.1	0.519	-	-	0.816	0.0002	0.006	-	-	-
Mean 2026.03	56.4	-	54.4	-	74	0.478	-	-	0.642	0.0008	0.013	-	-	-
Mean Variant 2026.02	55.7	0.973	54.2	-	65.6	0.25	54.3	50	0.408	0.001	0.013	0.508	0.508	0.508
Mean Variant (Overall) 2026.03	55.7	-	54.2	-	65.6	0.25	-	-	0.408	0.001	0.013	-	-	-
Mean Variant 2026.02	55.4	0.999	54.2	0.019	72.7	0.489	54.3	50.1	0.517	0.0006	0.007	0.612	0.587	0.655
Mean Variant (per Batch) 2026.03	55.4	-	54.2	-	72.7	0.489	-	-	0.517	0.0006	0.007	-	-	-
Linear 2026.02	54.9	0.997	58.1	0.194	66.6	0.366	59.1	55.6	0.646	0.0004	0.009	0.658	0.67	0.903
Linear 2026.03	54.9	-	58.1	-	66.6	0.366	-	-	0.646	0.0004	0.009	-	-	-
PerturbDiff 2026.02	53.3	0.991	58.8	0.387	70.1	0.431	66.9	64.7	0.705	0.0003	0.008	0.941	0.959	0.972
STATE 2026.02	51.2	0.998	54.7	-0.363	78.9	0.602	54.7	51.3	0.796	0.0001	0.005	0.954	0.943	0.985
STATE 2026.03	51.2	-	54.7	-	78.9	0.602	-	-	0.796	0.0001	0.005	-	-	-
Mean Variant 2026.02	50.6	0.992	54.2	-0.108	63.5	0.247	54.2	50	0.4	0.0006	0.009	0.625	0.596	0.612
Mean Variant (per Cell Type) 2026.03	50.6	-	54.2	-	63.5	0.247	-	-	0.4	0.0006	0.009	-	-	-
CPA 2026.02	48.8	0.919	51.5	-0.154	53.9	0.369	51.5	50	0.181	0.011	0.052	0.576	0.613	0.597
CPA 2026.03	48.8	-	51.5	-	53.9	0.369	-	-	0.181	0.011	0.052	-	-	-
Squidiff 2026.02	35.9	-218	54.7	-	37.9	0.022	54.7	50	0.033	4.387	2.062	0.508	0.508	0.508
Squidiff 2026.03	35.9	-	54.7	-	37.9	0.022	-	-	0.033	4.387	2.062	-	-	-
CellFlow 2026.02	27	0.994	35	0.042	65.2	0.377	35.4	50.2	0.628	0.0004	0.009	0.639	0.689	0.725
CellFlow 2026.03	27	-	35	-	65.2	0.377	-	-	0.628	0.0004	0.009	-	-	-